< Back to small molecule database

US11180484, Example 26

E3L022753
Internal ID: BDB022753
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB022753/BDB022753.sdf
Basic Properties
Compound ID
E3L022753
Internal ID
BDB022753
Molecular formula
C25H23F2N5O3
Molecular weight
479.487000
Exact mass
479.176896
XLogP
2.8910
TPSA
91.0400
HBA / HBD
5 / 1
Rotatable bonds
9
Heavy atoms / rings
35 / 4
Activity summary
IC50 > 40000.00000000 nM
1 activity record(s) imported
InChIKey
LBBWYBIVLDSOSM-UHFFFAOYSA-N
SMILES
COCc1nn(Cc2ccc(Cn3ccccc3=O)cc2)cc1C(=O)NCc1ncc(F)cc1F
Aliases
BDBM528095 (preferred) US11180484, Example 26 (source_name) BDBM528095 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII
reported_binder bindingdb_reported Yes No low BindingDB:BDBM528095 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM528095 Open - 10.7270/Q2MG7SP5
PubChem CID139301863 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COCc1nn(Cc2ccc(Cn3ccccc3=O)cc2)cc1C(=O)NCc1ncc(F)cc1F keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB022753/BDB022753.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB022753/BDB022753.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB022753/BDB022753.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB022753/BDB022753.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB022753/BDB022753.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM528095 IC50 >40000 nM Low DOI: 10.7270/Q2MG7SP5 1