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US11192880, Example X-2

E3L022787
Internal ID: BDB022787
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB022787/BDB022787.sdf
Basic Properties
Compound ID
E3L022787
Internal ID
BDB022787
Molecular formula
C23H27ClN6O4
Molecular weight
486.960000
Exact mass
486.178231
XLogP
2.4639
TPSA
110.6100
HBA / HBD
8 / 2
Rotatable bonds
6
Heavy atoms / rings
34 / 4
Activity summary
IC50 unknown 1200.00000000 nM
1 activity record(s) imported
InChIKey
KNJJXBVNLZTWPR-OKILXGFUSA-N
SMILES
CNC(=O)COc1cc2cc(Nc3nc(N4C[C@@H](C)O[C@@H](C)C4)ncc3Cl)ccc2n(C)c1=O
Aliases
BDBM528567 (preferred) US11192880, Example X-2 (source_name) BDBM528567 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM528567 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM528567 Open - 10.7270/Q26976RK
PubChem CID142606271 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(=O)COc1cc2cc(Nc3nc(N4C[C@@H](C)O[C@@H](C)C4)ncc3Cl)ccc2n(C)c1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB022787/BDB022787.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB022787/BDB022787.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB022787/BDB022787.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB022787/BDB022787.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB022787/BDB022787.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component 		BindingDB:BDBM528567 IC50 1200 nM Low DOI: 10.7270/Q26976RK 1