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US11236047, Example 127

E3L023458
Internal ID: BDB023458
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB023458/BDB023458.sdf
Basic Properties
Compound ID
E3L023458
Internal ID
BDB023458
Molecular formula
C32H27Cl2FN2O5
Molecular weight
609.481000
Exact mass
608.128106
XLogP
6.6927
TPSA
99.9600
HBA / HBD
5 / 2
Rotatable bonds
9
Heavy atoms / rings
42 / 5
Activity summary
IC50 unknown 4.50000000 nM
2 activity record(s) imported
InChIKey
KHSRSNYUTBONQS-LTZUXFEUSA-N
SMILES
CCC(O)(c1cc(F)c2c(c1)C(=O)N([C@@H](CC(=O)O)c1ccc(Cl)cc1)[C@@]2(OC)c1ccc(Cl)cc1)c1ccccn1
Aliases
BDBM535262 (preferred) US11236047, Example 127 (source_name) BDBM535262 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM535262 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM535262 Open - 10.7270/Q2XD14WT
PubChem CID135281621 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCC(O)(c1cc(F)c2c(c1)C(=O)N([C@@H](CC(=O)O)c1ccc(Cl)cc1)[C@@]2(OC)c1ccc(Cl)cc1)c1ccccn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB023458/BDB023458.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB023458/BDB023458.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB023458/BDB023458.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB023458/BDB023458.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB023458/BDB023458.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM535262 IC50 110 nM Moderate DOI: 10.7270/Q2XD14WT 1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM535262 IC50 4.5 nM Very high DOI: 10.7270/Q2XD14WT 1