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US11236047, Example 239

E3L023474
Internal ID: BDB023474
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB023474/BDB023474.sdf
Basic Properties
Compound ID
E3L023474
Internal ID
BDB023474
Molecular formula
C31H36Cl2N4O3
Molecular weight
583.560000
Exact mass
582.216446
XLogP
5.1254
TPSA
69.1400
HBA / HBD
6 / 1
Rotatable bonds
8
Heavy atoms / rings
40 / 5
Activity summary
IC50 unknown 15.00000000 nM
2 activity record(s) imported
InChIKey
NIQLOSGJNQWVPZ-NLIBRCFJSA-N
SMILES
CO[C@]1(c2ccc(Cl)cc2)c2ccc(C(C)(O)CN(C)C3CCN(C)CC3)cc2C(=O)N1Cc1ccc(Cl)cn1
Aliases
BDBM535310 (preferred) US11236047, Example 239 (source_name) BDBM535310 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2
reported_binder bindingdb_reported Yes No low BindingDB:BDBM535310 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM535310 Open - 10.7270/Q2XD14WT; 10.7270/Q2FJ2MZX
PubChem CID135282584 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CO[C@]1(c2ccc(Cl)cc2)c2ccc(C(C)(O)CN(C)C3CCN(C)CC3)cc2C(=O)N1Cc1ccc(Cl)cn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB023474/BDB023474.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB023474/BDB023474.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB023474/BDB023474.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB023474/BDB023474.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB023474/BDB023474.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM535310 IC50 15 nM High DOI: 10.7270/Q2XD14WT 1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM535310 IC50 15 nM High DOI: 10.7270/Q2FJ2MZX 1