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US11236047, Example 259

E3L023486
Internal ID: BDB023486
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB023486/BDB023486.sdf
Basic Properties
Compound ID
E3L023486
Internal ID
BDB023486
Molecular formula
C29H32Cl2N4O3
Molecular weight
555.506000
Exact mass
554.185146
XLogP
4.5225
TPSA
91.9200
HBA / HBD
6 / 2
Rotatable bonds
7
Heavy atoms / rings
38 / 5
Activity summary
IC50 unknown 9.70000000 nM
2 activity record(s) imported
InChIKey
YWQGLDHZKOMWAR-YPJJGMIRSA-N
SMILES
CO[C@]1(c2ccc(Cl)cc2)c2ccc(C(C)(O)CN3CCC(N)CC3)cc2C(=O)N1Cc1ccc(Cl)cn1
Aliases
BDBM535323 (preferred) US11236047, Example 259 (source_name) BDBM535323 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM535323 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM535323 Open - 10.7270/Q2XD14WT; 10.7270/Q2FJ2MZX
PubChem CID135282311 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CO[C@]1(c2ccc(Cl)cc2)c2ccc(C(C)(O)CN3CCC(N)CC3)cc2C(=O)N1Cc1ccc(Cl)cn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB023486/BDB023486.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB023486/BDB023486.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB023486/BDB023486.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB023486/BDB023486.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB023486/BDB023486.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM535323 IC50 9.7 nM Very high DOI: 10.7270/Q2FJ2MZX 1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM535323 IC50 9.7 nM Very high DOI: 10.7270/Q2XD14WT 1