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US11236047, Example 187

E3L023538
Internal ID: BDB023538
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB023538/BDB023538.sdf
Basic Properties
Compound ID
E3L023538
Internal ID
BDB023538
Molecular formula
C26H22Cl2FN5O3
Molecular weight
542.398000
Exact mass
541.108373
XLogP
4.4153
TPSA
93.3700
HBA / HBD
6 / 1
Rotatable bonds
6
Heavy atoms / rings
37 / 5
Activity summary
IC50 unknown 5.50000000 nM
2 activity record(s) imported
InChIKey
SVSYHJNAJSDECL-FXDYGKIASA-N
SMILES
CO[C@]1(c2ccc(Cl)cc2)c2c(F)cc(C(C)(O)c3cn(C)nn3)cc2C(=O)N1Cc1ccc(Cl)cn1
Aliases
BDBM535392 (preferred) US11236047, Example 187 (source_name) BDBM535392 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2
reported_binder bindingdb_reported Yes No low BindingDB:BDBM535392 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM535392 Open - 10.7270/Q2XD14WT; 10.7270/Q2FJ2MZX
PubChem CID135282110 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CO[C@]1(c2ccc(Cl)cc2)c2c(F)cc(C(C)(O)c3cn(C)nn3)cc2C(=O)N1Cc1ccc(Cl)cn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB023538/BDB023538.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB023538/BDB023538.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB023538/BDB023538.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB023538/BDB023538.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB023538/BDB023538.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM535392 IC50 5.5 nM Very high DOI: 10.7270/Q2XD14WT 1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM535392 IC50 5.5 nM Very high DOI: 10.7270/Q2FJ2MZX 1