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US11236047, Example 223

E3L023563
Internal ID: BDB023563
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB023563/BDB023563.sdf
Basic Properties
Compound ID
E3L023563
Internal ID
BDB023563
Molecular formula
C30H27Cl2FN4O4
Molecular weight
597.474000
Exact mass
596.139339
XLogP
5.1794
TPSA
89.7100
HBA / HBD
6 / 1
Rotatable bonds
7
Heavy atoms / rings
41 / 6
Activity summary
IC50 unknown 2.60000000 nM
2 activity record(s) imported
InChIKey
YSIGKCLZFXUHTB-DHSZNAABSA-N
SMILES
Cn1cc(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(Cl)cn2)[C@@]3(O[C@H]2CCOC2)c2ccc(Cl)cc2)cn1
Aliases
BDBM535426 (preferred) US11236047, Example 223 (source_name) BDBM535426 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM535426 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM535426 Open - 10.7270/Q2XD14WT; 10.7270/Q2FJ2MZX
PubChem CID135282418 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cn1cc(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(Cl)cn2)[C@@]3(O[C@H]2CCOC2)c2ccc(Cl)cc2)cn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB023563/BDB023563.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB023563/BDB023563.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB023563/BDB023563.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB023563/BDB023563.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB023563/BDB023563.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM535426 IC50 2.6 nM Very high DOI: 10.7270/Q2XD14WT 1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM535426 IC50 2.6 nM Very high DOI: 10.7270/Q2FJ2MZX 1