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US11236092, Example 105

E3L023609
Internal ID: BDB023609
Activity data available Local docking-ready structure
Dock with Q6GQQ9
Structure
/e3_file/ligand_db/generated/BDB023609/BDB023609.sdf
Basic Properties
Compound ID
E3L023609
Internal ID
BDB023609
Molecular formula
C21H19N5O
Molecular weight
357.417000
Exact mass
357.158960
XLogP
3.2061
TPSA
84.8100
HBA / HBD
4 / 2
Rotatable bonds
1
Heavy atoms / rings
27 / 5
Activity summary
IC50 unknown 550.00000000 nM
2 activity record(s) imported
InChIKey
IPHNXWSLDIBDAI-UHFFFAOYSA-N
SMILES
Cc1n[nH]c2cc(-c3ccc4c(c3)CC3(CCN(C#N)C3)C(=O)N4)ccc12
Aliases
BDBM535742 (preferred) US11236092, Example 105 (source_name) BDBM535742 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q6GQQ9 OTUD7B;ZA20D1
OTU domain-containing protein 7B (EC 3.4.19.12) (Cellular zinc finger anti-NF-kappa-B protein) (Cezanne) (Zinc finger A20 domain-containing protein 1) (Zinc finger protein Cezanne)		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM535742 medium
; target=OTU domain-containing protein 7B
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM535742 Open - 10.7270/Q28P63QX
PubChem CID137378644 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1n[nH]c2cc(-c3ccc4c(c3)CC3(CCN(C#N)C3)C(=O)N4)ccc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB023609/BDB023609.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB023609/BDB023609.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB023609/BDB023609.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB023609/BDB023609.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB023609/BDB023609.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
OTU domain-containing protein 7B
Q6GQQ9
E3 ligase component 		BindingDB:BDBM535742 IC50 550 nM Moderate DOI: 10.7270/Q28P63QX 2 source records