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US11236047, Example 461

E3L023631
Internal ID: BDB023631
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB023631/BDB023631.sdf
Basic Properties
Compound ID
E3L023631
Internal ID
BDB023631
Molecular formula
C32H30ClFN6O4
Molecular weight
617.081000
Exact mass
616.200109
XLogP
4.3073
TPSA
137.3900
HBA / HBD
8 / 2
Rotatable bonds
8
Heavy atoms / rings
44 / 6
Activity summary
IC50 unknown 0.53000000 nM
2 activity record(s) imported
InChIKey
SIFDSZDGKUGJTO-NQSPBDJXSA-N
SMILES
CCC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(C#N)cn1)[C@@]2(OC1CCC(O)C1)c1ccc(Cl)cc1)c1cn(C)cn1
Aliases
BDBM535770 (preferred) US11236047, Example 461 (source_name) BDBM535770 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM535770 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM535770 Open - 10.7270/Q2XD14WT
PubChem CID137512742 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(C#N)cn1)[C@@]2(OC1CCC(O)C1)c1ccc(Cl)cc1)c1cn(C)cn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB023631/BDB023631.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB023631/BDB023631.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB023631/BDB023631.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB023631/BDB023631.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB023631/BDB023631.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM535770 IC50 0.6 nM Very high DOI: 10.7270/Q2XD14WT 1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM535770 IC50 0.53 nM Very high DOI: 10.7270/Q2XD14WT 1