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US11236047, Example 513

E3L023653
Internal ID: BDB023653
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB023653/BDB023653.sdf
Basic Properties
Compound ID
E3L023653
Internal ID
BDB023653
Molecular formula
C28H26ClFN4O4
Molecular weight
536.991000
Exact mass
536.162661
XLogP
4.0144
TPSA
119.5700
HBA / HBD
7 / 2
Rotatable bonds
8
Heavy atoms / rings
38 / 5
Activity summary
IC50 unknown 3.10000000 nM
1 activity record(s) imported
InChIKey
XJGKRRJKFHLFEF-MUUNZHRXSA-N
SMILES
CC(C)(O)c1cc(F)c2c(c1)C(=O)N(Cc1ncc(C#N)cn1)[C@@]2(OCC1(CO)CC1)c1ccc(Cl)cc1
Aliases
BDBM535797 (preferred) US11236047, Example 513 (source_name) BDBM535797 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM535797 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM535797 Open - 10.7270/Q2XD14WT
PubChem CID163407656 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)(O)c1cc(F)c2c(c1)C(=O)N(Cc1ncc(C#N)cn1)[C@@]2(OCC1(CO)CC1)c1ccc(Cl)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB023653/BDB023653.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB023653/BDB023653.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB023653/BDB023653.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB023653/BDB023653.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB023653/BDB023653.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM535797 IC50 3.1 nM Very high DOI: 10.7270/Q2XD14WT 1