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BDBM536444

E3L023778
Internal ID: BDB023778
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB023778/BDB023778.sdf
Basic Properties
Compound ID
E3L023778
Internal ID
BDB023778
Molecular formula
C30H30ClF3N8O4
Molecular weight
659.069000
Exact mass
658.203064
XLogP
3.2505
TPSA
151.6100
HBA / HBD
8 / 3
Rotatable bonds
7
Heavy atoms / rings
46 / 6
Activity summary
Kd unknown 7.97000000 nM
1 activity record(s) imported
InChIKey
VGJQCRDFIWDPMP-AWEZNQCLSA-N
SMILES
CCN1CCN(c2cc(NC(=O)Cn3cc(-c4cc(C(N)=O)c(O)c(F)c4F)c4c(=O)n5c(nc43)CCC5)c(Cl)c(F)n2)[C@@H](C)C1
Aliases
BDBM536444 (preferred) BDBM536444 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM536444 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM536444 Open - 10.7270/Q2Z60S71
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCN1CCN(c2cc(NC(=O)Cn3cc(-c4cc(C(N)=O)c(O)c(F)c4F)c4c(=O)n5c(nc43)CCC5)c(Cl)c(F)n2)[C@@H](C)C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB023778/BDB023778.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB023778/BDB023778.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB023778/BDB023778.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB023778/BDB023778.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB023778/BDB023778.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component 		BindingDB:BDBM536444 Kd 7.97 nM Very high DOI: 10.7270/Q2Z60S71 1