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BDBM538070

E3L024026
Internal ID: BDB024026
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB024026/BDB024026.sdf
Basic Properties
Compound ID
E3L024026
Internal ID
BDB024026
Molecular formula
C24H20F3N4O2P
Molecular weight
484.418000
Exact mass
484.127597
XLogP
3.8348
TPSA
78.9500
HBA / HBD
5 / 1
Rotatable bonds
4
Heavy atoms / rings
34 / 5
Activity summary
IC50 < 100.00000000 nM
1 activity record(s) imported
InChIKey
ZHSPDLMSKOGJLI-UHFFFAOYSA-N
SMILES
O=c1[nH]nc(Cc2ccc(F)c(P3(=O)CCN(c4ncc(F)cc4F)CC3)c2)c2ccccc12
Aliases
BDBM538070 (preferred) 4-[[3-[1-(3,5-difluoro-2-pyridinyl)-4-oxo-1,4lambda5-azaphosphinan-4-yl]-4-fluorophenyl]methyl]-2H-phthalazin-1-one (source_name) BDBM538070 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM538070 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM538070 Open - 10.7270/Q20Z76F7
PubChem CID71478624 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=c1[nH]nc(Cc2ccc(F)c(P3(=O)CCN(c4ncc(F)cc4F)CC3)c2)c2ccccc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB024026/BDB024026.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB024026/BDB024026.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB024026/BDB024026.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB024026/BDB024026.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB024026/BDB024026.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM538070 IC50 <100 nM High DOI: 10.7270/Q20Z76F7 1