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US11312723, Example 8

E3L025348
Internal ID: BDB025348
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB025348/BDB025348.sdf
Basic Properties
Compound ID
E3L025348
Internal ID
BDB025348
Molecular formula
C21H25N5O3
Molecular weight
395.463000
Exact mass
395.195740
XLogP
3.2367
TPSA
106.2400
HBA / HBD
5 / 2
Rotatable bonds
1
Heavy atoms / rings
29 / 4
Activity summary
IC50 unknown 50000.00000000 nM
1 activity record(s) imported
InChIKey
GVFPRHVKUVRFCT-UHFFFAOYSA-N
SMILES
Cc1cc2c(C(=O)n3nc(N)c4c3CN(C(=O)OC(C)(C)C)CC4)cccc2[nH]1
Aliases
BDBM551850 (preferred) US11312723, Example 8 (source_name) BDBM551850 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII
reported_binder bindingdb_reported Yes No low BindingDB:BDBM551850 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM551850 Open - 10.7270/Q2XK8JRC
PubChem CID155163376 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cc2c(C(=O)n3nc(N)c4c3CN(C(=O)OC(C)(C)C)CC4)cccc2[nH]1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB025348/BDB025348.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB025348/BDB025348.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB025348/BDB025348.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB025348/BDB025348.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB025348/BDB025348.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM551850 IC50 50000 nM Low DOI: 10.7270/Q2XK8JRC 1