< Back to small molecule database

US11312723, Example 15

E3L025355
Internal ID: BDB025355
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB025355/BDB025355.sdf
Basic Properties
Compound ID
E3L025355
Internal ID
BDB025355
Molecular formula
C17H20ClN5O3S
Molecular weight
409.899000
Exact mass
409.097538
XLogP
1.6760
TPSA
110.3200
HBA / HBD
6 / 2
Rotatable bonds
2
Heavy atoms / rings
27 / 4
Activity summary
IC50 > 65000.00000000 nM
1 activity record(s) imported
InChIKey
SNJVJSQDSBOPIZ-UHFFFAOYSA-N
SMILES
CS(=O)(=O)N1CCc2c(N)nn(C(=O)C3CCNc4ccc(Cl)cc43)c2C1
Aliases
BDBM551857 (preferred) US11312723, Example 15 (source_name) BDBM551857 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII
reported_binder bindingdb_reported Yes No low BindingDB:BDBM551857 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM551857 Open - 10.7270/Q2XK8JRC
PubChem CID151874523 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CS(=O)(=O)N1CCc2c(N)nn(C(=O)C3CCNc4ccc(Cl)cc43)c2C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB025355/BDB025355.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB025355/BDB025355.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB025355/BDB025355.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB025355/BDB025355.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB025355/BDB025355.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM551857 IC50 >65000 nM Low DOI: 10.7270/Q2XK8JRC 1