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US11312723, Example 86

E3L025415
Internal ID: BDB025415
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB025415/BDB025415.sdf
Basic Properties
Compound ID
E3L025415
Internal ID
BDB025415
Molecular formula
C17H21N5O
Molecular weight
311.389000
Exact mass
311.174610
XLogP
1.6928
TPSA
76.1800
HBA / HBD
5 / 2
Rotatable bonds
1
Heavy atoms / rings
23 / 4
Activity summary
IC50 unknown 1250.00000000 nM
1 activity record(s) imported
InChIKey
SYQGDYUVBXUMRU-UHFFFAOYSA-N
SMILES
CN1CCc2nn(C(=O)C3CCNc4ccccc43)c(N)c2C1
Aliases
BDBM551922 (preferred) US11312723, Example 86 (source_name) BDBM551922 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII
reported_binder bindingdb_reported Yes No low BindingDB:BDBM551922 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM551922 Open - 10.7270/Q2XK8JRC
PubChem CID152840495 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCc2nn(C(=O)C3CCNc4ccccc43)c(N)c2C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB025415/BDB025415.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB025415/BDB025415.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB025415/BDB025415.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB025415/BDB025415.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB025415/BDB025415.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM551922 IC50 1250 nM Low DOI: 10.7270/Q2XK8JRC 1