< Back to small molecule database

US11312723, Example 99

E3L025426
Internal ID: BDB025426
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB025426/BDB025426.sdf
Basic Properties
Compound ID
E3L025426
Internal ID
BDB025426
Molecular formula
C18H19N5O2
Molecular weight
337.383000
Exact mass
337.153875
XLogP
1.8481
TPSA
97.0100
HBA / HBD
4 / 2
Rotatable bonds
1
Heavy atoms / rings
25 / 4
Activity summary
IC50 unknown 40.00000000 nM
1 activity record(s) imported
InChIKey
VLGUBEADTUAFOJ-UHFFFAOYSA-N
SMILES
CC(=O)N1CCc2c(nn(C(=O)c3cccc4[nH]c(C)cc34)c2N)C1
Aliases
BDBM551933 (preferred) US11312723, Example 99 (source_name) BDBM551933 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII
reported_binder bindingdb_reported Yes No low BindingDB:BDBM551933 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM551933 Open - 10.7270/Q2XK8JRC
PubChem CID153070582 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(=O)N1CCc2c(nn(C(=O)c3cccc4[nH]c(C)cc34)c2N)C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB025426/BDB025426.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB025426/BDB025426.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB025426/BDB025426.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB025426/BDB025426.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB025426/BDB025426.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM551933 IC50 40 nM High DOI: 10.7270/Q2XK8JRC 1