< Back to small molecule database

US11312723, Example 150

E3L025472
Internal ID: BDB025472
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB025472/BDB025472.sdf
Basic Properties
Compound ID
E3L025472
Internal ID
BDB025472
Molecular formula
C19H24FN5O
Molecular weight
357.433000
Exact mass
357.196489
XLogP
2.6121
TPSA
76.1800
HBA / HBD
5 / 2
Rotatable bonds
3
Heavy atoms / rings
26 / 4
Activity summary
IC50 > 70000.00000000 nM
1 activity record(s) imported
InChIKey
OAZMTUINZJZHLE-UHFFFAOYSA-N
SMILES
CCCN1CCc2c(N)nn(C(=O)C3CCNc4ccc(F)cc43)c2C1
Aliases
BDBM551979 (preferred) US11312723, Example 150 (source_name) BDBM551979 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII
reported_binder bindingdb_reported Yes No low BindingDB:BDBM551979 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM551979 Open - 10.7270/Q2XK8JRC
PubChem CID148731193 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCCN1CCc2c(N)nn(C(=O)C3CCNc4ccc(F)cc43)c2C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB025472/BDB025472.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB025472/BDB025472.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB025472/BDB025472.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB025472/BDB025472.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB025472/BDB025472.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM551979 IC50 >70000 nM Low DOI: 10.7270/Q2XK8JRC 1