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WO2022103411, Example S23

E3L025547
Internal ID: BDB025547
Activity data available Local docking-ready structure
Dock with P40337
Structure
/e3_file/ligand_db/generated/BDB025547/BDB025547.sdf
Basic Properties
Compound ID
E3L025547
Internal ID
BDB025547
Molecular formula
C34H41ClN6O3S
Molecular weight
649.261000
Exact mass
648.264938
XLogP
5.6934
TPSA
113.2400
HBA / HBD
7 / 2
Rotatable bonds
8
Heavy atoms / rings
45 / 9
Activity summary
IC50 unknown 20.00000000 nM
1 activity record(s) imported
InChIKey
DYJLPMZYSNVISA-IILCGFKCSA-N
SMILES
Cc1ncsc1-c1ccc(C(C)NC(=O)C2C[C@@H](O)CN2C(=O)[C@H](C2C3CC4CC(C3)CC2C4)n2cc(C3CC3)nn2)c(Cl)c1
Aliases
BDBM552707 (preferred) WO2022103411, Example S23 (source_name) BDBM552707 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P40337 VHL
von Hippel-Lindau disease tumor suppressor		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM552707 medium
; target=von Hippel-Lindau disease tumor suppressor
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM552707 Open - 10.7270/Q2WM1HMJ
PubChem CID164607741 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1ncsc1-c1ccc(C(C)NC(=O)C2C[C@@H](O)CN2C(=O)[C@H](C2C3CC4CC(C3)CC2C4)n2cc(C3CC3)nn2)c(Cl)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB025547/BDB025547.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB025547/BDB025547.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB025547/BDB025547.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB025547/BDB025547.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB025547/BDB025547.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
von Hippel-Lindau disease tumor suppressor
P40337
E3 ligase component 		BindingDB:BDBM552707 IC50 20 nM High DOI: 10.7270/Q2WM1HMJ 1