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US11319299, Example 97

E3L025711
Internal ID: BDB025711
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB025711/BDB025711.sdf
Basic Properties
Compound ID
E3L025711
Internal ID
BDB025711
Molecular formula
C29H34F2N6O2
Molecular weight
536.627000
Exact mass
536.271131
XLogP
4.2678
TPSA
73.8300
HBA / HBD
7 / 1
Rotatable bonds
5
Heavy atoms / rings
39 / 5
Activity summary
Kd unknown 2.21000000 nM
1 activity record(s) imported
InChIKey
QTPUIDDNZCGPCD-FQEVSTJZSA-N
SMILES
Cc1cc(C(=O)Nc2cc(-c3cnc(N4CCOCC4)nc3)c(F)cc2N2CCN(C)[C@@H](C)C2)cc(C)c1F
Aliases
BDBM553047 (preferred) US11319299, Example 97 (source_name) BDBM553047 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM553047 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM553047 Open - 10.7270/Q27W6GD6
PubChem CID138551314 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cc(C(=O)Nc2cc(-c3cnc(N4CCOCC4)nc3)c(F)cc2N2CCN(C)[C@@H](C)C2)cc(C)c1F keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB025711/BDB025711.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB025711/BDB025711.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB025711/BDB025711.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB025711/BDB025711.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB025711/BDB025711.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component 		BindingDB:BDBM553047 Kd 2.21 nM Very high DOI: 10.7270/Q27W6GD6 1