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BDBM553071

E3L025734
Internal ID: BDB025734
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB025734/BDB025734.sdf
Basic Properties
Compound ID
E3L025734
Internal ID
BDB025734
Molecular formula
C28H29F4N7O4
Molecular weight
603.577000
Exact mass
603.221715
XLogP
2.5995
TPSA
115.9200
HBA / HBD
9 / 2
Rotatable bonds
5
Heavy atoms / rings
43 / 6
Activity summary
Kd > 200.00000000 nM
1 activity record(s) imported
InChIKey
DLDABIZUNYEMEK-UHFFFAOYSA-N
SMILES
O=C(Nc1cc(-c2cnc(N3CCOCC3)nc2)c(F)cc1N1CCN2CCOCC2C1)c1c[nH]c(=O)cc1C(F)(F)F
Aliases
BDBM553071 (preferred) BDBM553071 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM553071 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM553071 Open - 10.7270/Q27W6GD6
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(Nc1cc(-c2cnc(N3CCOCC3)nc2)c(F)cc1N1CCN2CCOCC2C1)c1c[nH]c(=O)cc1C(F)(F)F keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB025734/BDB025734.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB025734/BDB025734.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB025734/BDB025734.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB025734/BDB025734.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB025734/BDB025734.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM553071 Kd >200 nM Uncertain DOI: 10.7270/Q27W6GD6 1