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US11319299, Example 182

E3L025796
Internal ID: BDB025796
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB025796/BDB025796.sdf
Basic Properties
Compound ID
E3L025796
Internal ID
BDB025796
Molecular formula
C27H35FN8O2S
Molecular weight
554.696000
Exact mass
554.258772
XLogP
3.0300
TPSA
89.9600
HBA / HBD
10 / 1
Rotatable bonds
7
Heavy atoms / rings
39 / 5
Activity summary
Kd > 200.00000000 nM
1 activity record(s) imported
InChIKey
WZTJEHAHJNDWAR-SFHVURJKSA-N
SMILES
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2csc(CN(C)C)n2)CCN1C
Aliases
BDBM553133 (preferred) US11319299, Example 182 (source_name) BDBM553133 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM553133 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM553133 Open - 10.7270/Q27W6GD6
PubChem CID138551382 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2csc(CN(C)C)n2)CCN1C keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB025796/BDB025796.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB025796/BDB025796.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB025796/BDB025796.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB025796/BDB025796.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB025796/BDB025796.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component 		BindingDB:BDBM553133 Kd >200 nM Uncertain DOI: 10.7270/Q27W6GD6 1