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US11319299, Example 428

E3L026016
Internal ID: BDB026016
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB026016/BDB026016.sdf
Basic Properties
Compound ID
E3L026016
Internal ID
BDB026016
Molecular formula
C30H35F4N7O3
Molecular weight
617.648000
Exact mass
617.273751
XLogP
4.0096
TPSA
95.8300
HBA / HBD
8 / 1
Rotatable bonds
8
Heavy atoms / rings
44 / 5
Activity summary
Kd unknown 145.00000000 nM
1 activity record(s) imported
InChIKey
CTAZSSJAKLEXTN-HXUWFJFHSA-N
SMILES
CCN(CC)[C@@H]1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C1
Aliases
BDBM553354 (preferred) US11319299, Example 428 (source_name) BDBM553354 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM553354 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM553354 Open - 10.7270/Q27W6GD6
PubChem CID137377000 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCN(CC)[C@@H]1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB026016/BDB026016.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB026016/BDB026016.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB026016/BDB026016.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB026016/BDB026016.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB026016/BDB026016.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM553354 Kd 145 nM Moderate DOI: 10.7270/Q27W6GD6 1