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US11447493, Example 24

E3L027526
Internal ID: BDB027526
Activity data available Local docking-ready structure
Dock with P51948
Structure
/e3_file/ligand_db/generated/BDB027526/BDB027526.sdf
Basic Properties
Compound ID
E3L027526
Internal ID
BDB027526
Molecular formula
C25H30N6O3
Molecular weight
462.554000
Exact mass
462.237939
XLogP
3.4376
TPSA
109.2200
HBA / HBD
6 / 2
Rotatable bonds
6
Heavy atoms / rings
34 / 4
Activity summary
IC50 unknown 65000.00000000 nM
1 activity record(s) imported
InChIKey
LCOFGIFLLYDPNW-HXUWFJFHSA-N
SMILES
CCC(=O)Nc1ccc(C(=O)N2CCC[C@@H](Nc3ncc4ccc(=O)n(C(C)C)c4n3)C2)cc1
Aliases
BDBM572059 (preferred) US11447493, Example 24 (source_name) BDBM572059 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P51948 MNAT1;CAP35;MAT1;RNF66
CDK-activating kinase assembly factor MAT1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM572059 medium
; target=Cyclin-H
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM572059 Open - 10.7270/Q2CF9TBB
PubChem CID156086795 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCC(=O)Nc1ccc(C(=O)N2CCC[C@@H](Nc3ncc4ccc(=O)n(C(C)C)c4n3)C2)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB027526/BDB027526.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB027526/BDB027526.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB027526/BDB027526.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB027526/BDB027526.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB027526/BDB027526.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Cyclin-H
P51948
E3 ligase component 		BindingDB:BDBM572059 IC50 65000 nM Low DOI: 10.7270/Q2CF9TBB 1