< Back to small molecule database

US11447493, Example 29

E3L027531
Internal ID: BDB027531
Activity data available Local docking-ready structure
Dock with P51948
Structure
/e3_file/ligand_db/generated/BDB027531/BDB027531.sdf
Basic Properties
Compound ID
E3L027531
Internal ID
BDB027531
Molecular formula
C23H23N5O3
Molecular weight
417.469000
Exact mass
417.180090
XLogP
3.0895
TPSA
96.4500
HBA / HBD
6 / 2
Rotatable bonds
6
Heavy atoms / rings
31 / 4
Activity summary
IC50 unknown 65000.00000000 nM
1 activity record(s) imported
InChIKey
PWIPCKSOLCEBRW-GOSISDBHSA-N
SMILES
C=CC(=O)Nc1ccc(C(=O)N2CC[C@@H](Nc3ncc4cc(OC)ccc4n3)C2)cc1
Aliases
BDBM572064 (preferred) US11447493, Example 29 (source_name) BDBM572064 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P51948 MNAT1;CAP35;MAT1;RNF66
CDK-activating kinase assembly factor MAT1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM572064 medium
; target=Cyclin-H
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM572064 Open - 10.7270/Q2CF9TBB
PubChem CID151530374 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C=CC(=O)Nc1ccc(C(=O)N2CC[C@@H](Nc3ncc4cc(OC)ccc4n3)C2)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB027531/BDB027531.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB027531/BDB027531.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB027531/BDB027531.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB027531/BDB027531.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB027531/BDB027531.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Cyclin-H
P51948
E3 ligase component 		BindingDB:BDBM572064 IC50 65000 nM Low DOI: 10.7270/Q2CF9TBB 1