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US11447493, Example 56

E3L027558
Internal ID: BDB027558
Activity data available Local docking-ready structure
Dock with P51948
Structure
/e3_file/ligand_db/generated/BDB027558/BDB027558.sdf
Basic Properties
Compound ID
E3L027558
Internal ID
BDB027558
Molecular formula
C23H23N5O4
Molecular weight
433.468000
Exact mass
433.175004
XLogP
3.0031
TPSA
124.5200
HBA / HBD
6 / 3
Rotatable bonds
6
Heavy atoms / rings
32 / 4
Activity summary
IC50 unknown 550.00000000 nM
1 activity record(s) imported
InChIKey
UZRHOKXLDQYYHC-GOSISDBHSA-N
SMILES
CCC(=O)Nc1ccc(C(=O)N2CC[C@@H](Nc3ncc4ccc(C(=O)O)cc4n3)C2)cc1
Aliases
BDBM572091 (preferred) US11447493, Example 56 (source_name) BDBM572091 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P51948 MNAT1;CAP35;MAT1;RNF66
CDK-activating kinase assembly factor MAT1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM572091 medium
; target=Cyclin-H
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM572091 Open - 10.7270/Q2CF9TBB
PubChem CID156086729 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCC(=O)Nc1ccc(C(=O)N2CC[C@@H](Nc3ncc4ccc(C(=O)O)cc4n3)C2)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB027558/BDB027558.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB027558/BDB027558.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB027558/BDB027558.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB027558/BDB027558.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB027558/BDB027558.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Cyclin-H
P51948
E3 ligase component 		BindingDB:BDBM572091 IC50 550 nM Moderate DOI: 10.7270/Q2CF9TBB 1