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BDBM575279

E3L027954
Internal ID: BDB027954
Activity data available Local docking-ready structure
Dock with Q16531 Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB027954/BDB027954.sdf
Basic Properties
Compound ID
E3L027954
Internal ID
BDB027954
Molecular formula
C15H17N3O3
Molecular weight
287.319000
Exact mass
287.126991
XLogP
0.5318
TPSA
78.5100
HBA / HBD
4 / 2
Rotatable bonds
2
Heavy atoms / rings
21 / 3
Activity summary
Kd unknown 30000.00000000 nM
4 activity record(s) imported
InChIKey
SEWNAJMCSLKSOJ-UHFFFAOYSA-N
SMILES
CN1CCc2ccc(NC3CCC(=O)NC3=O)cc2C1=O
Aliases
BDBM575279 (preferred) 3-[(2-Methyl-1-oxo-3,4-dihydroisoquinolin-7-yl)amino]piperidine-2,6-dione (source_name) BDBM575279 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q16531 DDB1;XAP1
DNA damage-binding protein 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM575279 medium
; target=DNA damage-binding protein 1
Q96SW2 CRBN;AD-006
Protein cereblon		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM575279 medium
; target=DNA damage-binding protein 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM575279 Open - 10.7270/Q2H1357Z; 10.7270/Q20869F6
PubChem CID142506284 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCc2ccc(NC3CCC(=O)NC3=O)cc2C1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB027954/BDB027954.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB027954/BDB027954.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB027954/BDB027954.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB027954/BDB027954.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB027954/BDB027954.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
DNA damage-binding protein 1
Q16531
E3 ligase component 		BindingDB:BDBM575279 Kd 30000 nM Low DOI: 10.7270/Q2H1357Z 2 source records
DNA damage-binding protein 1
Q16531
E3 ligase component 		BindingDB:BDBM575279 Kd 30000 nM Low DOI: 10.7270/Q20869F6 2 source records