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BDBM575282

E3L027957
Internal ID: BDB027957
Activity data available Local docking-ready structure
Dock with Q16531 Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB027957/BDB027957.sdf
Basic Properties
Compound ID
E3L027957
Internal ID
BDB027957
Molecular formula
C19H25N3O4
Molecular weight
359.426000
Exact mass
359.184506
XLogP
2.1969
TPSA
87.7400
HBA / HBD
5 / 2
Rotatable bonds
2
Heavy atoms / rings
26 / 3
Activity summary
Kd < 10000.00000000 nM
4 activity record(s) imported
InChIKey
BDOGAFGRVRIDLU-UHFFFAOYSA-N
SMILES
CC(C)(C)OC(=O)N1CCc2cc(NC3CCC(=O)NC3=O)ccc2C1
Aliases
BDBM575282 (preferred) tert-butyl 6-[(2,6-dioxopiperidin-3-yl)amino]-3,4-dihydro-1H-isoquinoline-2-carboxylate (source_name) BDBM575282 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q16531 DDB1;XAP1
DNA damage-binding protein 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM575282 medium
; target=DNA damage-binding protein 1
Q96SW2 CRBN;AD-006
Protein cereblon		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM575282 medium
; target=DNA damage-binding protein 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM575282 Open - 10.7270/Q2H1357Z; 10.7270/Q20869F6
PubChem CID146573460 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)(C)OC(=O)N1CCc2cc(NC3CCC(=O)NC3=O)ccc2C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB027957/BDB027957.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB027957/BDB027957.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB027957/BDB027957.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB027957/BDB027957.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB027957/BDB027957.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
DNA damage-binding protein 1
Q16531
E3 ligase component 		BindingDB:BDBM575282 Kd <10000 nM Uncertain DOI: 10.7270/Q20869F6 2 source records
DNA damage-binding protein 1
Q16531
E3 ligase component 		BindingDB:BDBM575282 Kd <10000 nM Uncertain DOI: 10.7270/Q2H1357Z 2 source records