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1-Pyridin-2-yl-1,3-diazinane-2,4-dione

E3L028770
Internal ID: BDB028770
Activity data available Local docking-ready structure
Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB028770/BDB028770.sdf
Basic Properties
Compound ID
E3L028770
Internal ID
BDB028770
Molecular formula
C9H9N3O2
Molecular weight
191.190000
Exact mass
191.069477
XLogP
0.5279
TPSA
62.3000
HBA / HBD
3 / 1
Rotatable bonds
1
Heavy atoms / rings
14 / 2
Activity summary
IC50 > 100000.00000000 nM
1 activity record(s) imported
InChIKey
CLTJSERAQIAUHR-UHFFFAOYSA-N
SMILES
O=C1CCN(c2ccccn2)C(=O)N1
Aliases
BDBM581733 (preferred) 1-Pyridin-2-yl-1,3-diazinane-2,4-dione (source_name) BDBM581733 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96SW2 CRBN;AD-006
Protein cereblon		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM581733 medium
; target=Protein cereblon
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM581733 Open - 10.7270/Q24B3549
PubChem CID77802550 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C1CCN(c2ccccn2)C(=O)N1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB028770/BDB028770.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB028770/BDB028770.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB028770/BDB028770.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB028770/BDB028770.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB028770/BDB028770.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein cereblon
Q96SW2
E3 ligase component 		BindingDB:BDBM581733 IC50 >100000 nM Low DOI: 10.7270/Q24B3549 1