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5-(1-Methylindol-3-yl)-1,3-thiazolidine-2,4-dione

E3L028784
Internal ID: BDB028784
Activity data available Local docking-ready structure
Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB028784/BDB028784.sdf
Basic Properties
Compound ID
E3L028784
Internal ID
BDB028784
Molecular formula
C12H10N2O2S
Molecular weight
246.291000
Exact mass
246.046299
XLogP
2.2024
TPSA
51.1000
HBA / HBD
3 / 1
Rotatable bonds
1
Heavy atoms / rings
17 / 3
Activity summary
IC50 > 100000.00000000 nM
1 activity record(s) imported
InChIKey
XZIXBIKBGLHSTN-UHFFFAOYSA-N
SMILES
Cn1cc(C2SC(=O)NC2=O)c2ccccc21
Aliases
BDBM581749 (preferred) 5-(1-Methylindol-3-yl)-1,3-thiazolidine-2,4-dione (source_name) BDBM581749 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96SW2 CRBN;AD-006
Protein cereblon		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM581749 medium
; target=Protein cereblon
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM581749 Open - 10.7270/Q24B3549
PubChem CID142623438 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cn1cc(C2SC(=O)NC2=O)c2ccccc21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB028784/BDB028784.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB028784/BDB028784.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB028784/BDB028784.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB028784/BDB028784.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB028784/BDB028784.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein cereblon
Q96SW2
E3 ligase component 		BindingDB:BDBM581749 IC50 >100000 nM Low DOI: 10.7270/Q24B3549 1