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BDBM581809

E3L028833
Internal ID: BDB028833
Activity data available Local docking-ready structure
Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB028833/BDB028833.sdf
Basic Properties
Compound ID
E3L028833
Internal ID
BDB028833
Molecular formula
C11H11N3O3S
Molecular weight
265.294000
Exact mass
265.052112
XLogP
0.0778
TPSA
102.1500
HBA / HBD
5 / 2
Rotatable bonds
3
Heavy atoms / rings
18 / 2
Activity summary
IC50 unknown 5500.00000000 nM
1 activity record(s) imported
InChIKey
RARFQAFGECMHPW-UHFFFAOYSA-N
SMILES
NC(=O)c1ccnc(SC2CCC(=O)NC2=O)c1
Aliases
BDBM581809 (preferred) 2-(2,6-Dioxopiperidin-3-yl)sulfanylpyridine-4-carboxamide (source_name) BDBM581809 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96SW2 CRBN;AD-006
Protein cereblon		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM581809 medium
; target=Protein cereblon
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM581809 Open - 10.7270/Q24B3549
PubChem CID142623311 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready NC(=O)c1ccnc(SC2CCC(=O)NC2=O)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB028833/BDB028833.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB028833/BDB028833.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB028833/BDB028833.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB028833/BDB028833.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB028833/BDB028833.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein cereblon
Q96SW2
E3 ligase component 		BindingDB:BDBM581809 IC50 5500 nM Low DOI: 10.7270/Q24B3549 1