< Back to small molecule database

WO2023001061, Example 26

E3L028868
Internal ID: BDB028868
Activity data available Local docking-ready structure
Dock with P51948
Structure
/e3_file/ligand_db/generated/BDB028868/BDB028868.sdf
Basic Properties
Compound ID
E3L028868
Internal ID
BDB028868
Molecular formula
C19H28N8O
Molecular weight
384.488000
Exact mass
384.238608
XLogP
2.0663
TPSA
85.4000
HBA / HBD
7 / 1
Rotatable bonds
6
Heavy atoms / rings
28 / 4
Activity summary
IC50 < 50.00000000 nM
1 activity record(s) imported
InChIKey
BAWBHLYXTNQSAV-UHFFFAOYSA-N
SMILES
CC(C)c1cnn2c(NCc3ccnn3C)nc(OC3CCN(C)CC3)nc12
Aliases
BDBM581966 (preferred) WO2023001061, Example 26 (source_name) BDBM581966 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P51948 MNAT1;CAP35;MAT1;RNF66
CDK-activating kinase assembly factor MAT1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM581966 medium
; target=Cyclin-H
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM581966 Open - 10.7270/Q2736VR9
PubChem CID166594744 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)c1cnn2c(NCc3ccnn3C)nc(OC3CCN(C)CC3)nc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB028868/BDB028868.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB028868/BDB028868.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB028868/BDB028868.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB028868/BDB028868.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB028868/BDB028868.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Cyclin-H
P51948
E3 ligase component 		BindingDB:BDBM581966 IC50 <50 nM High DOI: 10.7270/Q2736VR9 1