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BDBM582223

E3L029004
Internal ID: BDB029004
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB029004/BDB029004.sdf
Basic Properties
Compound ID
E3L029004
Internal ID
BDB029004
Molecular formula
C31H36Cl2N8O4
Molecular weight
655.587000
Exact mass
654.223657
XLogP
4.1644
TPSA
151.6100
HBA / HBD
8 / 3
Rotatable bonds
6
Heavy atoms / rings
45 / 5
Activity summary
Kd unknown 12.00000000 nM
1 activity record(s) imported
InChIKey
NVKWGDMAKPPLNR-UHFFFAOYSA-N
SMILES
Cc1nc2c(c(-c3cc(Cl)c(O)c(C(N)=O)c3)cn2CC(=O)Nc2cc(N3CC(C)(C)N(C)C(C)(C)C3)ncc2Cl)c(=O)n1C
Aliases
BDBM582223 (preferred) BDBM582223 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM582223 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM582223 Open - 10.7270/Q22B92WK
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1nc2c(c(-c3cc(Cl)c(O)c(C(N)=O)c3)cn2CC(=O)Nc2cc(N3CC(C)(C)N(C)C(C)(C)C3)ncc2Cl)c(=O)n1C keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB029004/BDB029004.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB029004/BDB029004.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB029004/BDB029004.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB029004/BDB029004.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB029004/BDB029004.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component 		BindingDB:BDBM582223 Kd 12 nM High DOI: 10.7270/Q22B92WK 1