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6-Phenyl-1,3-dihydro-indol-2-one

E3L029357
Internal ID: BDB029357
Activity data available Local docking-ready structure
Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB029357/BDB029357.sdf
Basic Properties
Compound ID
E3L029357
Internal ID
BDB029357
Molecular formula
C14H11NO
Molecular weight
209.248000
Exact mass
209.084064
XLogP
2.8482
TPSA
29.1000
HBA / HBD
1 / 1
Rotatable bonds
1
Heavy atoms / rings
16 / 3
Activity summary
IC50 > 300000.00000000 nM
1 activity record(s) imported
InChIKey
BRTXRFCARXOWJV-UHFFFAOYSA-N
SMILES
O=C1Cc2ccc(-c3ccccc3)cc2N1
Aliases
BDBM588279 (preferred) 6-Phenyl-1,3-dihydro-indol-2-one (source_name) BDBM588279 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96SW2 CRBN;AD-006
Protein cereblon
reported_binder bindingdb_reported Yes No low BindingDB:BDBM588279 medium
; target=Protein cereblon
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM588279 Open - 10.7270/Q2H41W8C
PubChem CID10536384 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C1Cc2ccc(-c3ccccc3)cc2N1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB029357/BDB029357.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB029357/BDB029357.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB029357/BDB029357.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB029357/BDB029357.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB029357/BDB029357.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein cereblon
Q96SW2
E3 ligase component
BindingDB:BDBM588279 IC50 >300000 nM Low DOI: 10.7270/Q2H41W8C 1