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US11584748, Example 18

E3L029479
Internal ID: BDB029479
Activity data available Local docking-ready structure
Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB029479/BDB029479.sdf
Basic Properties
Compound ID
E3L029479
Internal ID
BDB029479
Molecular formula
C15H15N3O3
Molecular weight
285.303000
Exact mass
285.111341
XLogP
1.4609
TPSA
75.4400
HBA / HBD
5 / 1
Rotatable bonds
1
Heavy atoms / rings
21 / 4
Activity summary
Kd unknown 46.00000000 nM
1 activity record(s) imported
InChIKey
QPVFUGHQRFQBHT-UHFFFAOYSA-N
SMILES
O=C1CCC2(CCN(c3nc4ccccc4o3)C2)C(=O)N1
Aliases
BDBM594651 (preferred) US11584748, Example 18 (source_name) BDBM594651 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96SW2 CRBN;AD-006
Protein cereblon
reported_binder bindingdb_reported Yes No low BindingDB:BDBM594651 medium
; target=Protein cereblon
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM594651 Open - 10.7270/Q2TH8RMF
PubChem CID146198258 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C1CCC2(CCN(c3nc4ccccc4o3)C2)C(=O)N1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB029479/BDB029479.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB029479/BDB029479.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB029479/BDB029479.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB029479/BDB029479.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB029479/BDB029479.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein cereblon
Q96SW2
E3 ligase component
BindingDB:BDBM594651 Kd 46 nM High DOI: 10.7270/Q2TH8RMF 1