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US11584748, Example 32

E3L029493
Internal ID: BDB029493
Activity data available Local docking-ready structure
Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB029493/BDB029493.sdf
Basic Properties
Compound ID
E3L029493
Internal ID
BDB029493
Molecular formula
C15H17N3O4
Molecular weight
303.318000
Exact mass
303.121906
XLogP
0.5013
TPSA
88.6000
HBA / HBD
6 / 1
Rotatable bonds
2
Heavy atoms / rings
22 / 3
Activity summary
Kd unknown 1.00000000 nM
1 activity record(s) imported
InChIKey
CLLLSNBLTMBAMO-UHFFFAOYSA-N
SMILES
COC(=O)c1cccc(N2CCC3(CCC(=O)NC3=O)C2)n1
Aliases
BDBM594665 (preferred) US11584748, Example 32 (source_name) BDBM594665 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96SW2 CRBN;AD-006
Protein cereblon
reported_binder bindingdb_reported Yes No low BindingDB:BDBM594665 medium
; target=Protein cereblon
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM594665 Open - 10.7270/Q2TH8RMF
PubChem CID146198245 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COC(=O)c1cccc(N2CCC3(CCC(=O)NC3=O)C2)n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB029493/BDB029493.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB029493/BDB029493.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB029493/BDB029493.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB029493/BDB029493.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB029493/BDB029493.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein cereblon
Q96SW2
E3 ligase component
BindingDB:BDBM594665 Kd 1 nM Very high DOI: 10.7270/Q2TH8RMF 1