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BDBM615667

E3L030635
Internal ID: BDB030635
Activity data available Local docking-ready structure
Dock with P29375
Structure
/e3_file/ligand_db/generated/BDB030635/BDB030635.sdf
Basic Properties
Compound ID
E3L030635
Internal ID
BDB030635
Molecular formula
C16H24N4O2
Molecular weight
304.394000
Exact mass
304.189926
XLogP
1.3757
TPSA
78.0900
HBA / HBD
3 / 2
Rotatable bonds
4
Heavy atoms / rings
22 / 3
Activity summary
IC50 unknown 50.00000000 nM
1 activity record(s) imported
InChIKey
IXZBELFRWCXTJD-YABSGUDNSA-N
SMILES
CC(C)NC(=O)[C@H]1[C@@H]2CN(C(=O)c3cc(C(C)C)[nH]n3)C[C@@H]21
Aliases
BDBM615667 (preferred) BDBM615667 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P29375 KDM5A;JARID1A;RBBP2;RBP2
Lysine-specific demethylase 5A		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM615667 medium
; target=Lysine-specific demethylase 5A
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM615667 Open - 10.7270/Q2639TWH
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)NC(=O)[C@H]1[C@@H]2CN(C(=O)c3cc(C(C)C)[nH]n3)C[C@@H]21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB030635/BDB030635.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB030635/BDB030635.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB030635/BDB030635.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB030635/BDB030635.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB030635/BDB030635.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Lysine-specific demethylase 5A
P29375
E3 ligase component 		BindingDB:BDBM615667 IC50 50 nM High DOI: 10.7270/Q2639TWH 1