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US20230287003, Example 1o

E3L030742
Internal ID: BDB030742
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB030742/BDB030742.sdf
Basic Properties
Compound ID
E3L030742
Internal ID
BDB030742
Molecular formula
C22H20ClN5O3
Molecular weight
437.887000
Exact mass
437.125467
XLogP
3.5557
TPSA
101.2000
HBA / HBD
7 / 2
Rotatable bonds
2
Heavy atoms / rings
31 / 5
Activity summary
IC50 unknown 724.00000000 nM
1 activity record(s) imported
InChIKey
HPUBEZRVMQEQPV-UHFFFAOYSA-N
SMILES
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)NC1(CCOC1)CCO2
Aliases
BDBM618492 (preferred) US20230287003, Example 1o (source_name) BDBM618492 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM618492 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM618492 Open - 10.7270/Q2RJ4PKC
PubChem CID155758460 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)NC1(CCOC1)CCO2 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB030742/BDB030742.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB030742/BDB030742.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB030742/BDB030742.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB030742/BDB030742.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB030742/BDB030742.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component 		BindingDB:BDBM618492 IC50 724 nM Moderate DOI: 10.7270/Q2RJ4PKC 1