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US20230287003, Example 4d

E3L030756
Internal ID: BDB030756
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB030756/BDB030756.sdf
Basic Properties
Compound ID
E3L030756
Internal ID
BDB030756
Molecular formula
C21H19ClF2N4O2
Molecular weight
432.858000
Exact mass
432.116460
XLogP
4.5487
TPSA
68.1800
HBA / HBD
5 / 2
Rotatable bonds
3
Heavy atoms / rings
30 / 5
Activity summary
IC50 unknown 10.00000000 nM
1 activity record(s) imported
InChIKey
FPMMRNJSPJNIBE-IBGZPJMESA-N
SMILES
Cn1c(=O)c2c(c3cc(Nc4ccncc4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
Aliases
BDBM618507 (preferred) US20230287003, Example 4d (source_name) BDBM618507 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM618507 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM618507 Open - 10.7270/Q2RJ4PKC
PubChem CID146191444 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cn1c(=O)c2c(c3cc(Nc4ccncc4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB030756/BDB030756.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB030756/BDB030756.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB030756/BDB030756.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB030756/BDB030756.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB030756/BDB030756.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component 		BindingDB:BDBM618507 IC50 10 nM Very high DOI: 10.7270/Q2RJ4PKC 1