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US20230287003, Example 8m

E3L030793
Internal ID: BDB030793
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB030793/BDB030793.sdf
Basic Properties
Compound ID
E3L030793
Internal ID
BDB030793
Molecular formula
C28H32ClN7O4
Molecular weight
566.062000
Exact mass
565.220430
XLogP
3.3910
TPSA
121.6900
HBA / HBD
9 / 2
Rotatable bonds
5
Heavy atoms / rings
40 / 6
Activity summary
IC50 unknown 525.00000000 nM
1 activity record(s) imported
InChIKey
PTIUUUVOEBQPGL-HXUWFJFHSA-N
SMILES
CN(C)C(=O)C1CCN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)C(=O)OC[C@H](C4CC4)N3)n2)CC1
Aliases
BDBM618546 (preferred) US20230287003, Example 8m (source_name) BDBM618546 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM618546 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM618546 Open - 10.7270/Q2RJ4PKC
PubChem CID146189009 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN(C)C(=O)C1CCN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)C(=O)OC[C@H](C4CC4)N3)n2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB030793/BDB030793.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB030793/BDB030793.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB030793/BDB030793.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB030793/BDB030793.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB030793/BDB030793.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component 		BindingDB:BDBM618546 IC50 525 nM Moderate DOI: 10.7270/Q2RJ4PKC 1