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US20230295130, Example T-05

E3L030845
Internal ID: BDB030845
Activity data available Local docking-ready structure
Dock with P51948
Structure
/e3_file/ligand_db/generated/BDB030845/BDB030845.sdf
Basic Properties
Compound ID
E3L030845
Internal ID
BDB030845
Molecular formula
C23H25F3N6O
Molecular weight
458.488000
Exact mass
458.204194
XLogP
4.2766
TPSA
77.1500
HBA / HBD
5 / 2
Rotatable bonds
4
Heavy atoms / rings
33 / 5
Activity summary
IC50 < 50.00000000 nM
1 activity record(s) imported
InChIKey
QTNJODOYENNLKJ-AWEZNQCLSA-N
SMILES
CN1CCC[C@H](Nc2ncc(C(F)(F)F)c(-c3c[nH]c4cc(N5CCCC5=O)ccc34)n2)C1
Aliases
BDBM619381 (preferred) US20230295130, Example T-05 (source_name) BDBM619381 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P51948 MNAT1;CAP35;MAT1;RNF66
CDK-activating kinase assembly factor MAT1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM619381 medium
; target=Cyclin-H
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM619381 Open - 10.7270/Q2TB1C2B
PubChem CID169428850 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCC[C@H](Nc2ncc(C(F)(F)F)c(-c3c[nH]c4cc(N5CCCC5=O)ccc34)n2)C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB030845/BDB030845.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB030845/BDB030845.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB030845/BDB030845.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB030845/BDB030845.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB030845/BDB030845.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Cyclin-H
P51948
E3 ligase component 		BindingDB:BDBM619381 IC50 <50 nM High DOI: 10.7270/Q2TB1C2B 1