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US20230295130, Example T-07

E3L030847
Internal ID: BDB030847
Activity data available Local docking-ready structure
Dock with P51948
Structure
/e3_file/ligand_db/generated/BDB030847/BDB030847.sdf
Basic Properties
Compound ID
E3L030847
Internal ID
BDB030847
Molecular formula
C23H25BrF3N7O
Molecular weight
552.399000
Exact mass
551.125605
XLogP
5.1468
TPSA
99.2500
HBA / HBD
7 / 4
Rotatable bonds
4
Heavy atoms / rings
35 / 5
Activity summary
IC50 < 50.00000000 nM
1 activity record(s) imported
InChIKey
UIUZXJMVBGOWMB-LBPRGKRZSA-N
SMILES
CC1(C)COC(Nc2ccc3c(-c4nc(N[C@H]5CCCNC5)ncc4C(F)(F)F)c[nH]c3c2Br)=N1
Aliases
BDBM619383 (preferred) US20230295130, Example T-07 (source_name) BDBM619383 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P51948 MNAT1;CAP35;MAT1;RNF66
CDK-activating kinase assembly factor MAT1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM619383 medium
; target=Cyclin-H
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM619383 Open - 10.7270/Q2TB1C2B
PubChem CID169428852 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC1(C)COC(Nc2ccc3c(-c4nc(N[C@H]5CCCNC5)ncc4C(F)(F)F)c[nH]c3c2Br)=N1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB030847/BDB030847.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB030847/BDB030847.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB030847/BDB030847.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB030847/BDB030847.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB030847/BDB030847.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Cyclin-H
P51948
E3 ligase component
BindingDB:BDBM619383 IC50 <50 nM High DOI: 10.7270/Q2TB1C2B 1