< Back to small molecule database

US20230295130, Example T-30

E3L030870
Internal ID: BDB030870
Activity data available Local docking-ready structure
Dock with P51948
Structure
/e3_file/ligand_db/generated/BDB030870/BDB030870.sdf
Basic Properties
Compound ID
E3L030870
Internal ID
BDB030870
Molecular formula
C21H21BrF3N5O3
Molecular weight
528.329000
Exact mass
527.077986
XLogP
5.2999
TPSA
112.1600
HBA / HBD
6 / 4
Rotatable bonds
4
Heavy atoms / rings
33 / 4
Activity summary
IC50 > 500.00000000 nM
2 activity record(s) imported
InChIKey
HHSHHGDJAFPGAP-QWRGUYRKSA-N
SMILES
COC(=O)Nc1ccc2c(-c3nc(N[C@H]4CCC[C@H](O)C4)ncc3C(F)(F)F)c[nH]c2c1Br
Aliases
BDBM619406 (preferred) US20230295130, Example T-30 (source_name) BDBM619406 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P51948 MNAT1;CAP35;MAT1;RNF66
CDK-activating kinase assembly factor MAT1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM619406 medium
; target=Cyclin-H
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM619406 Open - 10.7270/Q2TB1C2B
PubChem CID169428872 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COC(=O)Nc1ccc2c(-c3nc(N[C@H]4CCC[C@H](O)C4)ncc3C(F)(F)F)c[nH]c2c1Br keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB030870/BDB030870.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB030870/BDB030870.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB030870/BDB030870.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB030870/BDB030870.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB030870/BDB030870.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Cyclin-H
P51948
E3 ligase component 		BindingDB:BDBM619406 IC50 >500 nM Uncertain DOI: 10.7270/Q2TB1C2B 2 source records