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US20230303553, Example 6

E3L031023
Internal ID: BDB031023
Activity data available Local docking-ready structure
Dock with Q92630
Structure
/e3_file/ligand_db/generated/BDB031023/BDB031023.sdf
Basic Properties
Compound ID
E3L031023
Internal ID
BDB031023
Molecular formula
C21H18FN7OS
Molecular weight
435.488000
Exact mass
435.127757
XLogP
3.0764
TPSA
95.9300
HBA / HBD
8 / 2
Rotatable bonds
4
Heavy atoms / rings
31 / 5
Activity summary
IC50 unknown 31.00000000 nM
1 activity record(s) imported
InChIKey
GLXOBAUWZZUWAU-UHFFFAOYSA-N
SMILES
O=C(c1ccc(Nc2ncc(F)c(-c3ccc4ncsc4c3)n2)nc1)N1CCNCC1
Aliases
BDBM621013 (preferred) US20230303553, Example 6 (source_name) BDBM621013 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q92630 DYRK2
Dual specificity tyrosine-phosphorylation-regulated kinase 2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM621013 medium
; target=Dual specificity tyrosine-phosphorylation-regulated kinase 2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM621013 Open - 10.1021/acs.jmedchem.3c01626 PMID: 38033250
PubChem CID169073894 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(c1ccc(Nc2ncc(F)c(-c3ccc4ncsc4c3)n2)nc1)N1CCNCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB031023/BDB031023.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB031023/BDB031023.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB031023/BDB031023.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB031023/BDB031023.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB031023/BDB031023.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Dual specificity tyrosine-phosphorylation-regulated kinase 2
Q92630
E3 ligase component 		BindingDB:BDBM621013 IC50 31 nM High DOI: 10.1021/acs.jmedchem.3c01626
PMID: 38033250 		1