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BDBM628656

E3L031453
Internal ID: BDB031453
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB031453/BDB031453.sdf
Basic Properties
Compound ID
E3L031453
Internal ID
BDB031453
Molecular formula
C26H22Cl2N4O3
Molecular weight
509.393000
Exact mass
508.106896
XLogP
4.8708
TPSA
91.3400
HBA / HBD
5 / 2
Rotatable bonds
6
Heavy atoms / rings
35 / 5
Activity summary
IC50 unknown 21.00000000 nM
2 activity record(s) imported
InChIKey
UEAWYDNNRRPTDL-FXDYGKIASA-N
SMILES
CO[C@]1(c2ccc(Cl)cc2)c2ccc(C(C)(O)c3cn[nH]c3)cc2C(=O)N1Cc1ccc(Cl)cn1
Aliases
BDBM628656 (preferred) (3R)-3-(4-chlorophenyl)-2-[(5-chloro-2-pyridinyl)methyl]-6-[1-hydroxy-1-(1H-pyrazol-4-yl)ethyl]-3-methoxyisoindol-1-one (source_name) BDBM628656 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM628656 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM628656 Open - 10.7270/Q2FJ2MZX
PubChem CID135282144 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CO[C@]1(c2ccc(Cl)cc2)c2ccc(C(C)(O)c3cn[nH]c3)cc2C(=O)N1Cc1ccc(Cl)cn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB031453/BDB031453.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB031453/BDB031453.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB031453/BDB031453.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB031453/BDB031453.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB031453/BDB031453.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM628656 IC50 21 nM High DOI: 10.7270/Q2FJ2MZX 1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM628656 IC50 490 nM Moderate DOI: 10.7270/Q2FJ2MZX 1