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BDBM628789

E3L031496
Internal ID: BDB031496
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB031496/BDB031496.sdf
Basic Properties
Compound ID
E3L031496
Internal ID
BDB031496
Molecular formula
C28H27Cl2FN2O5
Molecular weight
561.437000
Exact mass
560.128106
XLogP
5.0440
TPSA
81.1200
HBA / HBD
6 / 1
Rotatable bonds
8
Heavy atoms / rings
38 / 5
Activity summary
IC50 unknown 0.73000000 nM
1 activity record(s) imported
InChIKey
JTWNLIFKVVQASM-QLCOJLISSA-N
SMILES
COC[C@](C)(O)c1cc(F)c2c(c1)C(=O)N(Cc1ccc(Cl)cn1)[C@@]2(O[C@H]1CCOC1)c1ccc(Cl)cc1
Aliases
BDBM628789 (preferred) BDBM628789 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM628789 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM628789 Open - 10.7270/Q2FJ2MZX
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COC[C@](C)(O)c1cc(F)c2c(c1)C(=O)N(Cc1ccc(Cl)cn1)[C@@]2(O[C@H]1CCOC1)c1ccc(Cl)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB031496/BDB031496.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB031496/BDB031496.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB031496/BDB031496.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB031496/BDB031496.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB031496/BDB031496.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM628789 IC50 0.73 nM Very high DOI: 10.7270/Q2FJ2MZX 1