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BDBM630901

E3L031507
Internal ID: BDB031507
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB031507/BDB031507.sdf
Basic Properties
Compound ID
E3L031507
Internal ID
BDB031507
Molecular formula
C23H27N5O3
Molecular weight
421.501000
Exact mass
421.211390
XLogP
2.2835
TPSA
100.2100
HBA / HBD
6 / 2
Rotatable bonds
6
Heavy atoms / rings
31 / 4
Activity summary
IC50 unknown 6.60000000 nM
1 activity record(s) imported
InChIKey
YAZUPJHTRARIAT-HSZRJFAPSA-N
SMILES
CCc1cc2ncc(CN3CC[C@@](C)(Oc4ccc(C(=O)NC)nc4)C3)cc2[nH]c1=O
Aliases
BDBM630901 (preferred) 5-[(3R)-1-[(7-ethyl-6-oxo-5H-1,5-naphthyridin-3-yl)methyl]-3-methylpyrrolidin-3-yl]oxy-N-methylpyridine-2-carboxamide (source_name) BDBM630901 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM630901 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM630901 Open - 10.7270/Q241726C
PubChem CID168188449 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCc1cc2ncc(CN3CC[C@@](C)(Oc4ccc(C(=O)NC)nc4)C3)cc2[nH]c1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB031507/BDB031507.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB031507/BDB031507.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB031507/BDB031507.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB031507/BDB031507.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB031507/BDB031507.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM630901 IC50 6.6 nM Very high DOI: 10.7270/Q241726C 1