< Back to small molecule database

US11802128, Example 21

E3L031510
Internal ID: BDB031510
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB031510/BDB031510.sdf
Basic Properties
Compound ID
E3L031510
Internal ID
BDB031510
Molecular formula
C23H27N5O3
Molecular weight
421.501000
Exact mass
421.211390
XLogP
1.2510
TPSA
95.9200
HBA / HBD
6 / 2
Rotatable bonds
7
Heavy atoms / rings
31 / 5
Activity summary
IC50 unknown 6.60000000 nM
1 activity record(s) imported
InChIKey
IFMSGFDJDBIULP-UHFFFAOYSA-N
SMILES
CCC1=CC2N=CC(CN3CC(Oc4ccc(C(=O)NC5CC5)nc4)C3)=CC2NC1=O
Aliases
BDBM630909 (preferred) US11802128, Example 21 (source_name) BDBM630909 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM630909 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM630909 Open - 10.7270/Q241726C
PubChem CID169490222 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCC1=CC2N=CC(CN3CC(Oc4ccc(C(=O)NC5CC5)nc4)C3)=CC2NC1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB031510/BDB031510.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB031510/BDB031510.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB031510/BDB031510.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB031510/BDB031510.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB031510/BDB031510.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM630909 IC50 6.6 nM Very high DOI: 10.7270/Q241726C 1