< Back to small molecule database

BDBM630910

E3L031511
Internal ID: BDB031511
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB031511/BDB031511.sdf
Basic Properties
Compound ID
E3L031511
Internal ID
BDB031511
Molecular formula
C21H20N4O2
Molecular weight
360.417000
Exact mass
360.158626
XLogP
2.6204
TPSA
82.0100
HBA / HBD
5 / 1
Rotatable bonds
5
Heavy atoms / rings
27 / 4
Activity summary
IC50 unknown 5.10000000 nM
1 activity record(s) imported
InChIKey
FDBKLFIWSHFCQC-UHFFFAOYSA-N
SMILES
CCc1cc2ncc(CN3CC(Oc4ccc(C#N)cc4)C3)cc2[nH]c1=O
Aliases
BDBM630910 (preferred) 4-[1-[(7-ethyl-6-oxo-5H-1,5-naphthyridin-3-yl)methyl]azetidin-3-yl]oxybenzonitrile (source_name) BDBM630910 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM630910 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM630910 Open - 10.7270/Q241726C
PubChem CID168188402 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCc1cc2ncc(CN3CC(Oc4ccc(C#N)cc4)C3)cc2[nH]c1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB031511/BDB031511.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB031511/BDB031511.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB031511/BDB031511.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB031511/BDB031511.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB031511/BDB031511.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM630910 IC50 5.1 nM Very high DOI: 10.7270/Q241726C 1