< Back to small molecule database

BDBM651660

E3L032195
Internal ID: BDB032195
Activity data available Local docking-ready structure
Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB032195/BDB032195.sdf
Basic Properties
Compound ID
E3L032195
Internal ID
BDB032195
Molecular formula
C23H22ClN3O5
Molecular weight
455.898000
Exact mass
455.124798
XLogP
3.4665
TPSA
104.8100
HBA / HBD
5 / 2
Rotatable bonds
4
Heavy atoms / rings
32 / 4
Activity summary
IC50 < 600.00000000 nM
1 activity record(s) imported
InChIKey
YWEPIHYNBGHYGJ-UHFFFAOYSA-N
SMILES
Cc1ccc(NC(=O)OCc2ccc3c(c2C)C(=O)N(C2CCC(=O)NC2=O)C3)cc1Cl
Aliases
BDBM651660 (preferred) [2-(2,6-dioxopiperidin-3-yl)-4-methyl-3-oxo-1H-isoindol-5-yl]methyl N-(3-chloro-4-methylphenyl)carbamate (source_name) BDBM651660 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96SW2 CRBN;AD-006
Protein cereblon		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM651660 medium
; target=Protein cereblon
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM651660 Open - 10.7270/Q2MP57G5
PubChem CID166074324 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1ccc(NC(=O)OCc2ccc3c(c2C)C(=O)N(C2CCC(=O)NC2=O)C3)cc1Cl keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB032195/BDB032195.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB032195/BDB032195.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB032195/BDB032195.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB032195/BDB032195.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB032195/BDB032195.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein cereblon
Q96SW2
E3 ligase component 		BindingDB:BDBM651660 IC50 <600 nM Uncertain DOI: 10.7270/Q2MP57G5 1