< Back to small molecule database

US20240059691, Example 1009

E3L032204
Internal ID: BDB032204
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB032204/BDB032204.sdf
Basic Properties
Compound ID
E3L032204
Internal ID
BDB032204
Molecular formula
C22H27N5O
Molecular weight
377.492000
Exact mass
377.221560
XLogP
3.5447
TPSA
76.3000
HBA / HBD
6 / 2
Rotatable bonds
6
Heavy atoms / rings
28 / 4
Activity summary
IC50 unknown 200.00000000 nM
1 activity record(s) imported
InChIKey
RTTUBFUCOXOZCQ-UHFFFAOYSA-N
SMILES
CN1CCC(COc2ccc(CNc3cccc4c(N)nccc34)cn2)CC1
Aliases
BDBM652429 (preferred) US20240059691, Example 1009 (source_name) BDBM652429 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM652429 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM652429 Open - 10.7270/Q2NG4VVD
PubChem CID163390547 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCC(COc2ccc(CNc3cccc4c(N)nccc34)cn2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB032204/BDB032204.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB032204/BDB032204.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB032204/BDB032204.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB032204/BDB032204.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB032204/BDB032204.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component 		BindingDB:BDBM652429 IC50 200 nM Moderate DOI: 10.7270/Q2NG4VVD 1